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Applied Biosystems™ Axiom™ Multispecies Plant Genotyping Array, (384HT format)

Catalog No. 550776
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384 Samples
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550776 384 Samples
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Catalog No. 550776 Supplier Applied Biosystems™ Supplier No. 550776

Please call Customer Service at 1-800-234-7437 or send an email to help@thermofisher.com for assistance.

Description

The Axiom Multispecies Plant Genotyping Array was designed in collaboration with Drs. Dario Grattapaglia and Orzenil B. Silva Junior, research scientists connected to Embrapa and Universidade Catolica de Brasilia, Brazil, with funding from CNPq grants. This array is also available in mini-96 format (Cat. No. 551231).

The Axiom Multispecies Plant Genotyping Array was designed in collaboration with Drs. Dario Grattapaglia and Orzenil B. Silva Junior, research scientists connected to Embrapa and Universidade Catolica de Brasilia, Brazil, with funding from CNPq grants. This array is also available in mini-96 format (Cat. No. 551231).

The array contains markers from multiple plant species:

  • Anacardium occidentale (Cashew nut tree): 16,504 SNPs
    • SNP discovery was conducted from whole-genome individual resequencing of 25 diverse accessions
  • Manihot esculenta (Cassava): 3,417 SNPs
    • SNP discovery was obtained from 20 resequenced accessions by JGI (NCBI data)
  • Araucaria angustifolia (Brazilian pine): 3,400 SNPs
    • SNP discovery was obtained from reduced representations of RAD and RNAseq data
  • Eucalyptus grandis (Eucalyptus tree): 2,000 SNPs
    • Current validated markers from the public domain

Required products

  • GeneChip Command Console Software
  • GeneTitan Multi-Channel Instrument
  • Axiom Analysis Suite Software
  • Axiom Long Export Format Software

Specifications

Type Multispecies Plant Genotyping Array
Array Genotyping
Number of Arrays 384 arrays
Format 384 HT-array Plate
Species Cashew, Araucaria, Cassava, Eucalyptus
Content And Storage Store in refrigerator (2°C to 8°C)
No. of Samples 384 samples
Quantity 384 Samples
Shipping Condition Room temperature