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Applied Biosystems™ Axiom™ Apple Genotyping Array (Axiom JKI50kMd), mini-96 format

Catalog No. 551435
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551435 1 plate
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Catalog No. 551435 Supplier Applied Biosystems™ Supplier No. 551435

Description

The Applied Biosystems™ Axiom™ Apple Genotyping array is a component of the Axiom Agrigenomics Genotyping solution where target genomic DNA is prepared and processed on the GeneTitan™ Multi-Channel instrument.

  • A component of the Axiom Agrigenomics Genotyping solution where target genomic DNA is prepared and processed on the GeneTitan Multi-Channel instrument
  • Automated process includes hybridization of the gDNA to this high-throughput microarray followed by staining, washing, imaging, and output of genotyping data for further analysis
  • The Axiom Apple Genotyping Array has 48,139 Malus SNPs
  • Designed using a panel of previously genotyped diverse cultivars, as well as a panel of wild Malus accessions.
  • The array was designed to include the following
    • Backwards-compatibility set of 7,711 SNPs with accurate and robust clustering on the Illumina Infinium 20K and the Applied Biosystems Axiom 480K arrays
    • Uniform coverage on the HFTH1 whole genome sequence, with a haploblocking strategy designed to include 8 SNPs in a 10 kB window every 125 kB
    • Validated SNPs for important traits
    • SNPs designed to be specific to the Malus species M. baccata, M. ×micromalus, M. orientalis, M. ×robusta, Malus sieversii, and M. sylvestris
    • A set of SNPs for the detection of S alleles

Specifications

Array Genotyping
Number of Arrays 96 arrays
Format Mini 96-array Plate
Species Apple
Content And Storage Store in refrigerator (2°C to 8°C)
Quantity 1 plate
Shipping Condition Room temperature